Computational Design Gene Editor

hace 1 semana


Madrid, Madrid, España Somma A tiempo completo
About the Role

The Centre for Genomic Regulation (CRG) is an international biomedical research institute of excellence, based in Barcelona, Spain, with more than 400 scientists from 44 countries. The CRG is composed of an interdisciplinary, motivated and creative scientific team supported by a flexible and efficient administration and by high-end and innovative technologies.

Main Responsibilities

The candidate will train large language and diffusion models to provide new protein variants that will be tested in the laboratory. The main responsibilities will include implementing and using machine learning models for the design of gene writer sequences.

About the Team

This research group focuses on using computational and experimental approaches to understand and design protein functions. We have extensive experience in deep unsupervised learning and protein design, which we have applied to various projects. Over the next few years, we will expand our focus to include the design of custom-tailored and new-to-nature protein functions. We will implement models, understand their decision-making process using XAI, and improve their performance through reinforcement learning. We will also include experimental characterization efforts, allowing continual improvement of our models.

Requirements

We seek exceptional candidates with a passion for computation and deep learning to solve biomedical challenges. Experience in bioinformatics, computational structural biology, or computational biology is required. Good understanding of software engineering and good code practices is also necessary. The capability of working independently on very fast-paced science is essential. A PhD in Bioinformatics, Synthetic Biology or a related field is desirable but not required. Experience in protein or enzyme design, knowledge about gene editing technologies such as CRISPR-associated nuclease-based tools, and good communication skills in English are also desirable.

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