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Postdoctoral Machine Learning Researcher for Nanopore Sequencing

hace 1 mes


Madrid, Madrid, España Euraxess A tiempo completo

Center for Biological Research Margarita Salas-CSIC

We are seeking a highly skilled Postdoctoral Machine Learning Researcher to join the ERC Chem2Sense project at the CIB Margarita Salas, part of the Spanish National Research Council (CSIC), a leading multidisciplinary research institute in Madrid, Spain.

About the Project:

The ERC Chem2Sense project aims to adapt nanopore sequencing basecallers for nucleotide modification detection using incremental learning and anomaly detection techniques. As a postdoctoral researcher, you will be responsible for developing, implementing, and optimizing machine learning models for nanopore sequencing basecallers.

Key Responsibilities:
  • Develop and implement machine learning models for nanopore sequencing basecallers.
  • Apply signal processing techniques to improve nucleotide modification detection.
  • Contribute to an innovative approach combining hybrid and modular nucleic acid derivatives.
  • Collaborate with wet lab researchers to validate computational predictions.
  • Contribute to the writing of scientific publications and reports.
Requirements:
  • Strong background in signal processing.
  • Extensive knowledge in the development of robust, scalable machine-learning models for research applications.
  • Experience in computational biology and nanopore sequencing data (preferred).
Qualifications:
  • PhD in Computer Science, Engineering, Bioinformatics, Computational Biology, or a related field.
  • Hands-on experience with deep learning frameworks (e.g., TensorFlow, PyTorch).
  • Proficiency in Python, R, and familiarity with scientific computing libraries.
  • High-level English communication skills.
  • Strong problem-solving skills and ability to work in a collaborative research environment.
About Us:

We offer a competitive salary according to individual qualifications/experience, as well as opportunities to work on cutting-edge research in nanopore sequencing, collaborate with a multidisciplinary team, and participate in academic events.

How to Apply:

Please submit your CV and a brief cover letter to us. Applications will be reviewed on a rolling basis.